PacBio workflow

Principle of PacBio workflow


LongRange PCR Whole HLA genes are amplified with NGSgo®-AmpX amplification primers in a single reaction using GenDx-LongRange polymerase. Library Preparation DNA template prep and related sequencing reagents are purchased directly from Pacific Biosciences. The amplicons generated by the NGSgo®-AmpX kit are ready to go directly into SMRTbell library preparation and subsequent SMRT® Sequencing

Product List

Group Product Description No. of Tests Cat. No.
AmpX CE NGSgo®-AmpX HLA-A 24/96 2840102/62
NGSgo®-AmpX HLA-B 24/96 2840202/62
NGSgo®-AmpX HLA-C 24/96 2840302/62
NGSgo®-AmpX HLA-DPB1 24/96 2840402/62
NGSgo®-AmpX HLA-DQB1 24/96 2840502/62
NGSgo®-AmpX HLA-DRB1 24/96 2840602/62
NGSgo®-AmpX HLA-DRB3/4/5 24/96 2840702/62
NGSgo®-AmpX HLA-DQA1 24/96 2840802/62
NGSgo®-AmpX HLA-DPA1 24/96 2840902/62
NGSgo®-AmpX HLA-G 24/96 2841002/62
NGSgo®-AmpX HLA-A, B, C, DRB1, DQB1 24/96 2841102/62
NGSgo®-AmpX HLA-DPA1, DPB1, DQA1, DRB3/4/5 24/96 2841502/62
NGSgo®-AmpX HLAGeneSuite™* 24/96 2841602/62
* HLA GeneSuite contains loci HLA-A, B, C, DRB1, DQB1, DPA1, DPB1, DQA1, DRB3/4/5

Data Analysis using NGSengine® HLA typing software

With over a decade of experience developing and supporting SBT HLA typing software we support Next Generation Sequencing HLA typing with NGSengine®.

Data analysis software – NGSengine®

NGSengine® is your platform-independent software for NGS data analysis of HLA genes. In one single method you determine reference libraries, align reads, phase the sequence data and perform typing. NGSengine® is the perfect match for our new NGSgo® reagents, delivering complete allele separation and full gene coverage.

NGSengine® gives you:

  •   Genotyping results with minimal editing
  •   No additional efforts for new sequences
  •   Reliable unambiguous HLA allele assignment
  •   Analysis of both exon and intron sequences
  •   New allele identification
  •   One-button analysis
  •   Automatic multiple loci analysis

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For any queries or detailed requirements, get in touch with our team of experts at Shiva Scientific.